• Title/Summary/Keyword: Medical Knowledge Representation

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A Methodology for Representation of Clinical Data in Oriental Medicine (한의학의 증상표현을 위한 방법론)

  • Park Kyung Mo;Park Jong Hyun
    • Journal of Physiology & Pathology in Korean Medicine
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    • v.16 no.5
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    • pp.845-850
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    • 2002
  • This paper suggest a methodology for representation of findings which can be called as signs and symptoms. A finding consists of unit signs and unit symptoms, and moreover findings which appear in one individual patient have so many different relationship each other. So, it is nat appropriate to list all of possible findings as medical standard or to fill findings as independent things in paper for medical record. We try to distinguish finding item from finding list, and suggest the methodology by which we can make finding list from finding items. That is, we suggest finding item[Concept], value types, relationship, logical operator, and syntax as a component of representation. And by using urinary symptom, we make the example for representation methodology. Finally, we mention the background knowledge, brief research process of related area.

A Study on Ontology Based Knowledge Representation Method with the Alzheimer Disease Related Articles (알츠하이머 관련 논문을 대상으로 하는 온톨로지 기반 지식 표현 방법 연구)

  • Lee, Jaeho;Kim, Younhee;Shin, Hyunkyung;Song, Kibong
    • Journal of Internet Computing and Services
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    • v.15 no.3
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    • pp.125-135
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    • 2014
  • In the medical field, for the purpose of diagnosis and treatment of diseases, building knowledge base has received a lot of attention. The most important thing to build a knowledge base is representing the knowledge accurately. In this paper we suggest a knowledge representation method using Ontology technique with the datasets obtained from the domestic papers on Alzheimer disease that has received a lot of attention recently in the medical field. The suggested Ontology for Alzheimer disease defines all the possible classes: lexical information from journals such as 'author' and 'publisher' research subjects extracted from 'title', 'abstract', 'keywords', and 'results'. It also included various semantic relationships between classes through the Ontology properties. Inference can be supported since our Ontology adopts hierarchical tree structure for the classes and transitional characteristics of the properties. Therefore, semantic representation based query is allowed as well as simple keyword query, which enables inference based knowledge query using an Ontology query language 'SPARQL'.

Study on a Methodology for Developing Shanghanlun Ontology (상한론(傷寒論)온톨로지 구축 방법론 연구)

  • Jung, Tae-Young;Kim, Hee-Yeol;Park, Jong-Hyun
    • Journal of Physiology & Pathology in Korean Medicine
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    • v.25 no.5
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    • pp.765-772
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    • 2011
  • Knowledge which is represented by formal logic are widely used in many domains such like artificial intelligence, information retrieval, e-commerce and so on. And for medical field, medical documentary records retrieval, information systems in hospitals, medical data sharing, remote treatment and expert systems need knowledge representation technology. To retrieve information intellectually and provide advanced information services, systematically controlled mechanism is needed to represent and share knowledge. Importantly, medical expert's knowledge should be represented in a form that is understandable to computers and also to humans to be applied to the medical information system supporting decision making. And it should have a suitable and efficient structure for its own purposes including reasoning, extendability of knowledge, management of data, accuracy of expressions, diversity, and so on. we call it ontology which can be processed with machines. We can use the ontology to represent traditional medicine knowledge in structured and systematic way with visualization, then also it can also be used education materials. Hence, the authors developed an Shanghanlun ontology by way of showing an example, so that we suggested a methodology for ontology development and also a model to structure the traditional medical knowledge. And this result can be used for student to learn Shanghanlun by graphical representation of it's knowledge. We analyzed the text of Shanghanlun to construct relational database including it's original text, symptoms and herb formulars. And then we classified the terms following some criterion, confirmed the structure of the ontology to describe semantic relations between the terms, especially we developed the ontology considering visual representation. The ontology developed in this study provides database showing fomulas, herbs, symptoms, the name of diseases and the text written in Shanghanlun. It's easy to retrieve contents by their semantic relations so that it is convenient to search knowledge of Shanghanlun and to learn it. It can display the related concepts by searching terms and provides expanded information with a simple click. It has some limitations such as standardization problems, short coverage of pattern(證), and error in chinese characters input. But we believe this research can be used for basic foundation to make traditional medicine more structural and systematic, to develop application softwares, and also to applied it in Shanghanlun educations.

A Study on Reasoning for Medical Expert Systems (의료용 전문가 시스템에서 추론에 관한 연구)

  • Kim, Jin-Sang;Shin, Yang-Kyu
    • Journal of the Korean Data and Information Science Society
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    • v.10 no.2
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    • pp.359-367
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    • 1999
  • We investigate a logical approach to represent medical knowledge, reason deductively and diagnostically. It is suggested that medical knowledge-bases can be formulated as a set of sentences stated in classical logic where each sentence reflects a doctor's knowledge about the human anatomy or his/her view of patient's symptoms. It is also suggested that a form of temporal reasoning can be captured within the same framework because each sentence can have a different truth value based on time. We apply our logical framework to formalize diagnostic reasoning, where the primary cause of illness is chosen among the set of minimal causation on the basis of abductive hypotheses. Most of our examples are given in the context of medical expert systems.

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A study of investigation and improvement to classification for oriental medicine in search portal web site (검색포털 지식검색에 대한 한의학분류체계 조사 및 개선방안 연구)

  • Kim, Chul
    • Journal of the Korean Institute of Oriental Medical Informatics
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    • v.15 no.1
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    • pp.1-10
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    • 2009
  • In these days everyone search the information easily with the Internet as the rapid distribution and active usage of the Internet. The search engines were developed specially to accuracy of information retrieval. User search the information more quickly and variously with them. The search portal system will be embossed with representation and basic services. The Internet user needs the result of text, image and video, knowledge search. The keyword based search is used generally for getting result of the information retrieval and another method is category based search. This paper investigates the classification of knowledge search structure for oriental medicine in market leader of search portal system by ranking web site. As a result, each classification system is unified and there is a possibility of getting up a many confusion to the user who approaches with classification systematic search method. This treatise proposed the improved oriental medicine classification system of internet information retrieval in knowledge search area. if the service provider amends about the classification system, there will be able to guarantee the compatibility of data. Also the proper access path of the knowledge which seeks is secured to user.

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FUZZY LOGIC KNOWLEDGE SYSTEMS AND ARTIFICIAL NEURAL NETWORKS IN MEDICINE AND BIOLOGY

  • Sanchez, Elie
    • Journal of the Korean Institute of Intelligent Systems
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    • v.1 no.1
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    • pp.9-25
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    • 1991
  • This tutorial paper has been written for biologists, physicians or beginners in fuzzy sets theory and applications. This field is introduced in the framework of medical diagnosis problems. The paper describes and illustrates with practical examples, a general methodology of special interest in the processing of borderline cases, that allows a graded assignment of diagnoses to patients. A pattern of medical knowledge consists of a tableau with linguistic entries or of fuzzy propositions. Relationships between symptoms and diagnoses are interpreted as labels of fuzzy sets. It is shown how possibility measures (soft matching) can be used and combined to derive diagnoses after measurements on collected data. The concepts and methods are illustrated in a biomedical application on inflammatory protein variations. In the case of poor diagnostic classifications, it is introduced appropriate ponderations, acting on the characterizations of proteins, in order to decrease their relative influence. As a consequence, when pattern matching is achieved, the final ranking of inflammatory syndromes assigned to a given patient might change to better fit the actual classification. Defuzzification of results (i.e. diagnostic groups assigned to patients) is performed as a non fuzzy sets partition issued from a "separating power", and not as the center of gravity method commonly employed in fuzzy control. It is then introduced a model of fuzzy connectionist expert system, in which an artificial neural network is designed to build the knowledge base of an expert system, from training examples (this model can also be used for specifications of rules in fuzzy logic control). Two types of weights are associated with the connections: primary linguistic weights, interpreted as labels of fuzzy sets, and secondary numerical weights. Cell activation is computed through MIN-MAX fuzzy equations of the weights. Learning consists in finding the (numerical) weights and the network topology. This feed forward network is described and illustrated in the same biomedical domain as in the first part.

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Development and Evaluation of Ontology for Diagnosis in Oriental Medicine (한의진단 Ontology 구축과 평가)

  • Shin Sang-Woo;Jung Gil-San;Park Kyung-Mo;Kim Seon-Ho;Park Jong-Hyun
    • Journal of Physiology & Pathology in Korean Medicine
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    • v.20 no.1
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    • pp.202-208
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    • 2006
  • The goal of this study is to develop knowledge representation method for the construction and evaluation of ontology for diagnosis in oriental medicine. To develop the expert system for decision making on diagnosis and treatment, the systematic and structural knowledge which can be processible in EMR(Electronic Medical Record) must be precedent, and the Computational Process which control the system as well. This study set up an ontology as a trial model to represent the oriental medical knowledge into the machine processible one. Protege 2.1 has been used to build the ontology, and the serialization format of our ontology is the XML document based on OWL. The components of oriental medical diagnosis was arranged with the combination of symptoms which belong to the certain symptom patterns. Then natural language which expresses the oriental medical diagnosis components were converted into the logical sentence, and individual characteristic symptoms into each values of specific properties. In addition to the study, the diagnosis software for oriental medicine was developed and it used the ontology which we developed. Sequently, we tested the software to confirm the appropriateness of ontology. The result of the test shows that diagnostic questions are automatically formulated according to the diagnosis components of this ontology and that as such diagnostic results are induced. Therefore, the ontology system in this study will be efficient to develop the diagnosis program and useful as a tool for doctors to make decision. But, it is not recommendable to apply the system to the clinical environment until the clear diagnosis standards are introduced, and the more reliable diagnosis program can be developed based on the more appropriate ontology mentioned above.

A Design of the Expert System for Diagnosis of Abnormal Gait by using Rule-Based Representation (규칙처리 표현방식을 이용한 이상 보행용 전문가 시스템의 설계)

  • Lee, Eung-Sang;Lee, Ju-Hyeong;Lee, Myoung-Ho
    • Proceedings of the KIEE Conference
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    • 1987.07b
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    • pp.1329-1332
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    • 1987
  • This paper describes a design of the expert system for diagnosis of abnormal gait patients. This system makes the rule-based representation that can easily extend the knowledge-base and naturally represent the uncertainty, and the inference engine that uses forward chaining which covers the reasoning from the first condition to the goal. The results of inferring various maladies using this system are as follows: 1) In cases of progressive muscular dystrophy, cerebral vascular accident, peripheral neuropathic lesion and peroneal nerve injury, the result of inference is the same as that of medical specialists' with 100% accuracy. 2) In cases of Neuritis, Paralysis agitan and Brain tumor, the accuracy of inference is less than 50% compared to that of medical specialists. With above results, we decide that the rule-based representations of some maladies ard accurate relatively, but that the correction and the extention of some rules and some methods of problem solving are required in order to construct the complete expert system for diagnosis of abnormal gait patients.

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CIS-A General Purpose Inference System for Building Expert System (전문가 시스템 구성을 위한 범용 추론 시스템-CIS)

  • Park, Jong Hoon;Choi, Jong Soo
    • Journal of the Korean Institute of Telematics and Electronics
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    • v.23 no.5
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    • pp.658-665
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    • 1986
  • In this paper, we study a (condition interprete systdem CCIS) which is a general purpose inference system for building an expert system. Previously, most expert systems used fragmentary knowledge-representation and inexact inferencing methods. To solve the proboems of those systems we suggest an algorithm for more flexible deduction and a method of representing knowledge more naturally and consistently compared to those of other experst systems. The CIS is a systsdem which can infer all the current situations from communication with the user based on user discription of some situation. we used some medical data on hypertension and its complication to simulate the system and to prove the effectiveness of the system. The results show that with the proposed method one can realize an attractive expert system.

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Semantic Representation of Concept of Bio-signal Data (생체 신호 데이터의 의미 관계 표현)

  • Moon, Kyung-Sil;Park, Su-Hyun
    • Journal of the Korea Institute of Information and Communication Engineering
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    • v.15 no.2
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    • pp.292-298
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    • 2011
  • In order to acquire new information and biological meaning of the signal data by defining the relationships between them, new modeling technique, ontology, has been proposed. The data of bio-signal can be represented as a systematic and logical to manage continuously bio-signal data using ontology. Furthermore, knowledge of which resources are utilized to provide improved service quality in medical information, health services in various fields. However, relevant studies have not been performed actively to compare importance of relationships between bio-signals. Therefore semantic representation of biometric information should be by defining the relationship between bio-signals. In this paper, we have developed bio-signal ontology to use as a model for using domain knowledge. We verified the usefulness of the ontology by using scenarios.